D16S539
|
Other Names |
Chromosomal Location |
GenBank Accession |
|
D16 |
16q22-24 |
G07925; has 11 repeat units |
Repeat: [GATA] = GenBank top strand
|
Reported Primers |
Ref. |
PCR Primer Sequences |
|
Set 1 |
Promega |
GenePrint® PowerPlex™ 1.1 |
|
Set 2 |
CHLC Web Site |
5'-GATCCCAAGCTCTTCCTCTT-3' 5'-ACGTTTGTGTGTGCATCTGT-3' |
|
Set 3 |
ABI |
AmpFlSTR® Profiler Plus™ |
PCR Product Sizes of Observed Alleles
|
Allele (Repeat #) |
Set 1 |
Set 2 |
Set 3 |
Repeat Structure |
Ref. |
|
5 |
264 bp |
141 bp |
233 bp |
[GATA]5 |
721 |
|
8 |
276 bp |
145 bp |
245 bp |
[GATA]8 |
721 |
|
9 |
280 bp |
149 bp |
249 bp |
[GATA]9 |
721 |
|
10 |
284 bp |
153 bp |
253 bp |
[GATA]10 |
721 |
|
11 |
288 bp |
157 bp |
257 bp |
[GATA]11 |
721 |
|
12 |
292 bp |
161 bp |
261 bp |
[GATA]12 |
721 |
|
13 |
296 bp |
165 bp |
265 bp |
[GATA]13 |
721 |
|
13.3 |
299 bp |
168 bp |
268 bp |
variant allele |
|
|
14 |
300 bp |
169 bp |
269 bp |
[GATA]14 |
721 |
|
15 |
304 bp |
173 bp |
273 bp |
[GATA]15 |
721 |
D18S51
|
Other Names |
Chromosomal Location |
GenBank Accession |
|
D18 |
18q21.3 |
X91254; has 21 repeats |
Repeat: [GAAA] = GenBank top strand
top = 13 repeats GAAA
|
Reported Primers |
Ref. |
PCR Primer Sequences |
|
Set 1 |
7, 369 |
5'-CAA ACC CGA CTA CCA GCA AC-3' (GAAA strand) 5'-GAG CCA TGT TCA TGC CAC TG-3' |
|
Set 2 |
ABI |
AmpFlSTR® Profiler Plus™ |
|
Set 3 |
Promega |
GenePrint® PowerPlex™ 2.1 |
PCR Product Sizes of Observed Alleles
|
Allele (Repeat #) |
Set 1 |
Set 2 |
Set 3 |
3' Flanking Sequence |
Repeat Structure |
Ref. |
|
7 |
262 bp |
264 bp |
286 bp |
SGM Plus |
||
|
8 |
266 bp |
268 bp |
290 bp |
AAAG AGAGAG |
[AGAA]8 |
716 |
|
9 |
270 bp |
272 bp |
294 bp |
AAAG AGAGAG |
[AGAA]9 |
716 |
|
9.2 |
272 bp |
274 bp |
296 bp |
SGM Plus |
||
|
10 |
274 bp |
276 bp |
298 bp |
AAAG AGAGAG |
[AGAA]10 |
716 |
|
10.2 |
276 bp |
278 bp |
300 bp |
SGM Plus |
||
|
11 |
278 bp |
280 bp |
302 bp |
AAAG AGAGAG |
[AGAA]11 |
716 |
|
12 |
282 bp |
284 bp |
306 bp |
AAAG AGAGAG |
[AGAA]12 |
716 |
|
12.2 |
284 bp |
286 bp |
308 bp |
SGM Plus |
||
|
13 |
286 bp |
288 bp |
310 bp |
AAAG AGAGAG |
[AGAA]13 |
716 |
|
13.1 |
287 bp |
289 bp |
311 bp |
variant allele |
||
|
13.2 |
288 bp |
290 bp |
312 bp |
AAAG AG AGAGAG |
[AGAA]13 |
369 |
|
14 |
290 bp |
292 bp |
314 bp |
AAAG AGAGAG |
[AGAA]14 |
716 |
|
14.2 |
292 bp |
294 bp |
316 bp |
AAAG AG AGAGAG |
[AGAA]14 |
369 |
|
15 |
294 bp |
296 bp |
318 bp |
AAAG AGAGAG |
[AGAA]15 |
716 |
|
15.1 |
295 bp |
297 bp |
319 bp |
SGM Plus |
||
|
15.2 |
296 bp |
298 bp |
320 bp |
AAAG AG AGAGAG |
[AGAA]15 |
369 |
|
16 |
298 bp |
300 bp |
322 bp |
AAAG AGAGAG |
[AGAA]16 |
716 |
|
16.2 |
300 bp |
302 bp |
324 bp |
SGM Plus |
||
|
16.3 |
301 bp |
303 bp |
325 bp |
SGM Plus |
||
|
17 |
302 bp |
304 bp |
326 bp |
AAAG AGAGAG |
[AGAA]17 |
716 |
|
17.1 |
303 bp |
305 bp |
327 bp |
SGM Plus |
||
|
17.2 |
304 bp |
306 bp |
328 bp |
AAAG AGAGAG |
[AGAA]17 |
375 |
|
17.3 |
305 bp |
307 bp |
329 bp |
SGM Plus |
||
|
18 |
306 bp |
308 bp |
330 bp |
AAAG AGAGAG |
[AGAA]18 |
716 |
|
18.1 |
307 bp |
309 bp |
331 bp |
SGM Plus |
||
|
18.2 |
308 bp |
310 bp |
332 bp |
SGM Plus |
||
|
19 |
310 bp |
312 bp |
334 bp |
AAAG AGAGAG |
[AGAA]19 |
716 |
|
19.2 |
312 bp |
314 bp |
336 bp |
AAAG AGAGAG |
[AGAA]19 |
375 |
|
20 |
314 bp |
316 bp |
338 bp |
AAAG AGAGAG |
[AGAA]20 |
716 |
|
20.1 |
315 bp |
317 bp |
339 bp |
SGM Plus |
||
|
20.2 |
316 bp |
318 bp |
340 bp |
SGM Plus |
||
|
21 |
318 bp |
320 bp |
342 bp |
AAAG AGAGAG |
[AGAA]21 |
716 |
|
21.2 |
320 bp |
322 bp |
344 bp |
|
SGM Plus |
|
|
22 |
322 bp |
324 bp |
346 bp |
AAAG AGAGAG |
[AGAA]22 |
716 |
|
22.1 |
323 bp |
325 bp |
347 bp |
variant allele |
||
|
23 |
326 bp |
328 bp |
350 bp |
AAAG AGAGAG |
[AGAA]23 |
716 |
|
23.1 |
327 bp |
329 bp |
351 bp |
SGM Plus |
||
|
24 |
330 bp |
332 bp |
354 bp |
AAAG AGAGAG |
[AGAA]24 |
716 |
|
25 |
334 bp |
336 bp |
358 bp |
AAAG AGAGAG |
[AGAA]25 |
716 |
|
26 |
338 bp |
340 bp |
362 bp |
AAAG AGAGAG |
[AGAA]26 |
716 |
|
27 |
342 bp |
344 bp |
366 bp |
AAAG AGAGAG |
[AGAA]27 |
716 |
|
Other Names |
Chromosomal Location |
GenBank Accession |
|
21q21.1 |
M84567; has 26 repeat units
|
Repeat: [TCTA], [TCTG]= GenBank top strand
|
Reported Primers |
Ref. |
PCR Primer Sequences |
|
Set 1 |
613, 34 |
5'-GTG AGT CAA TTC CCC AAG-3' 5'-GTT GTA TTA GTC AAT GTT CTC C-3' |
|
Set 2 |
5 |
5'-ATA TGT GAG TCA ATT CCC CAA G-3' 5'-TGT ATT AGT CAA TGT TCT CCA G-3' |
|
Set 3 |
ABI |
AmpFlSTR® Profiler Plus™ |
|
Set 4 |
Promega |
GenePrint® PowerPlex™ 2.1 |
PCR Product Sizes of Observed Alleles
|
Allele (Repeat #) (Ref. # 34) |
Allele (Repeat #) (Ref. # 5) |
Set 1,2 |
Set 3 |
Set 4 |
Repeat Structure |
Ref. |
|
24 |
53 |
202 bp |
186 bp |
203 bp |
[TCTA]4 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCATA [TCTA]6 |
716 |
|
24.2 |
54 |
204 bp |
188 bp |
205 bp |
[TCTA]4 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]8 |
312 |
|
25 |
55 |
206 bp |
190 bp |
207 bp |
[TCTA]4 [TCTG]3 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]10 |
312 |
|
25.2 |
56 |
208 bp |
192 bp |
209 bp |
[TCTA]5 [TCTG]6 [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]10 |
716 |
|
26 |
57 |
210 bp |
194 bp |
211 bp |
[TCTA]4 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]8 |
34 |
|
26.1 |
211 bp |
195 bp |
212 bp |
SGM Plus |
||
|
26.2 |
58 |
212 bp |
196 bp |
213 bp |
variant allele |
|
|
27 |
59 |
214 bp |
198 bp |
215 bp |
[TCTA]4 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]9 |
34 |
|
27' |
59 |
214 bp |
198 bp |
215 bp |
[TCTA]6 [TCTG]5 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]8 |
34 |
|
27" |
59 |
214 bp |
198 bp |
215 bp |
[TCTA]5 [TCTG]5 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]9 |
716 |
|
27.2 |
216 bp |
200 bp |
217 bp |
SGM Plus |
||
|
27.3 |
217 bp |
201 bp |
218 bp |
SGM Plus |
||
|
28 |
61 |
218 bp |
202 bp |
219 bp |
[TCTA]4 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]10 |
34 |
|
28' |
218 bp |
202 bp |
219 bp |
[TCTA]5 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]9 |
490 |
|
|
28.2 |
62 |
220 bp |
204 bp |
221 bp |
[TCTA]4 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]10 |
716 |
|
28.2' |
220 bp |
204 bp |
221 bp |
[TCTA]5 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]8 TA TCTA |
490 |
|
|
28.3 |
221 bp |
205 bp |
222 bp |
SGM Plus |
||
|
29 |
63 |
222 bp |
206 bp |
223 bp |
[TCTA]4 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]11 |
34 |
|
29' |
63 |
222 bp |
206 bp |
223 bp |
[TCTA]6 [TCTG]5 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]10 |
490 |
|
29.1 |
223 bp |
207 bp |
224 bp |
SGM Plus |
||
|
29.1 |
223 bp |
207 bp |
224 bp |
[TCTA]4 [TCTG]6 [TCTA]6 TCA [TCTA]2 TCCA TA [TCTA]11 |
GenBank AP000433 |
|
|
29.2 |
64 |
224 bp |
208 bp |
225 bp |
[TCTA]5 [TCTG]5 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]10 TA TCTA |
490 |
|
29.3 |
225 bp |
209 bp |
226 bp |
SGM Plus |
||
|
30 |
65 |
226 bp |
210 bp |
227 bp |
[TCTA]6 [TCTG]5 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]11 |
34 |
|
30' |
65 |
226 bp |
210 bp |
227 bp |
[TCTA]5 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]11 |
490 |
|
30" |
65 |
226 bp |
210 bp |
227 bp |
[TCTA]4 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]12 |
312 |
|
30"' |
65 |
226 bp |
210 bp |
227 bp |
[TCTA]6 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]10 |
404 |
|
30.1 |
227 bp |
211 bp |
228 bp |
SGM Plus |
||
|
30.2 |
66 |
228 bp |
212 bp |
229 bp |
[TCTA]5 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]10 TA TCTA |
34 |
|
31 |
67 |
230 bp |
214 bp |
231 bp |
[TCTA]5 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]12 |
716 |
|
31' |
67 |
230 bp |
214 bp |
231 bp |
[TCTA]6 [TCTG]5 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]12 |
34 |
|
31" |
67 |
230 bp |
214 bp |
231 bp |
[TCTA]6 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]11 |
490 |
|
31"' |
67 |
230 bp |
214 bp |
231 bp |
[TCTA]7 [TCTG]5 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]11 |
312 |
|
31.1 |
231 bp |
215 bp |
232 bp |
SGM Plus |
||
|
31.2 |
68 |
232 bp |
216 bp |
233 bp |
[TCTA]5 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]11 TA TCTA |
34 |
|
31.3 |
233 bp |
217 bp |
234 bp |
SGM Plus |
||
|
32 |
69 |
234 bp |
218 bp |
235 bp |
[TCTA]6 [TCTG]5 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]13 |
34 |
|
32' |
69 |
234 bp |
218 bp |
235 bp |
[TCTA]5 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]13 |
490 |
|
32.1 |
235 bp |
219 bp |
236 bp |
SGM Plus |
||
|
32.2 |
70 |
236 bp |
220 bp |
237 bp |
[TCTA]5 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]12 TA TCTA |
34 |
|
32.2' |
70 |
236 bp |
220 bp |
237 bp |
[TCTA]4 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]13 TA TCTA |
404 |
|
32.2" |
70 |
236 bp |
220 bp |
237 bp |
[TCTA]5 [TCTG]6 [TCTA]2 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]13 TA TCTA |
404 |
|
32.3 |
237 bp |
221 bp |
238 bp |
SGM Plus |
||
|
33 |
71 |
238 bp |
222 bp |
239 bp |
[TCTA]5 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]14 |
490 |
|
33.2 |
72 |
240 bp |
224 bp |
241 bp |
[TCTA]5 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]13 TA TCTA |
34 |
|
33.2' |
72 |
240 bp |
224 bp |
241 bp |
[TCTA]6 [TCTG]5 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]13 TA TCTA |
404 |
|
33.2" |
72 |
240 bp |
224 bp |
241 bp |
[TCTA]6 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]12 TA TCTA |
404 |
|
33.3 |
241 bp |
225 bp |
242 bp |
[TCTA]5 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]8 TCA [TCTA]2 TA TCTA |
404 |
|
|
34 |
73 |
242 bp |
226 bp |
243 bp |
[TCTA]10 [TCTG]5 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]11 |
404 |
|
34' |
73 |
242 bp |
226 bp |
243 bp |
[TCTA]5 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]15 |
490 |
|
34.2 |
74 |
244 bp |
228 bp |
245 bp |
[TCTA]4 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]14 TA TCTA |
34 |
|
34.3 |
245 bp |
229 bp |
246 bp |
[TCTA]5 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]10 TCA [TCTA]4TA TCTA |
404 |
|
|
35 |
75 |
246 bp |
230 bp |
247 bp |
[TCTA]11 [TCTG]5 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]11 |
404 |
|
35' |
75 |
246 bp |
230 bp |
247 bp |
[TCTA]10 [TCTG]5 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]12 |
716 |
|
35.1 |
247 bp |
231 bp |
248 bp |
variant allele |
||
|
35.2 |
76 |
248 bp |
232 bp |
249 bp |
[TCTA]5 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]15 TA TCTA |
490 |
|
35.3 |
249 bp |
233 bp |
250 bp |
SGM Plus |
||
|
36 |
77 |
250 bp |
234 bp |
251 bp |
[TCTA]10 [TCTG]5 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]13 |
404 |
|
36' |
77 |
250 bp |
234 bp |
251 bp |
[TCTA]11 [TCTG]5 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]12 |
716 |
|
36" |
77 |
250 bp |
234 bp |
251 bp |
[TCTA]10 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]12 |
404 |
|
36.2 |
252 bp |
236 bp |
253 bp |
[TCTA]5 [TCTG]6 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]16 TA TCTA |
490 |
|
|
36.3 |
253 bp |
237 bp |
254 bp |
SGM Plus |
||
|
37 |
78 |
254 bp |
238 bp |
255 bp |
[TCTA]9 [TCTG]11 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]12 |
404 |
|
37' |
78 |
254 bp |
238 bp |
255 bp |
[TCTA]11 [TCTG]5 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]13 |
716 |
|
37.2 |
256 bp |
240 bp |
257 bp |
SGM Plus |
||
|
38 |
79 |
258 bp |
242 bp |
259 bp |
[TCTA]9 [TCTG]11 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]13 |
404 |
|
38' |
79 |
258 bp |
242 bp |
259 bp |
[TCTA]13 [TCTG]5 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]12 |
716 |
|
38" |
79 |
258 bp |
242 bp |
259 bp |
[TCTA]10 [TCTG]11 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]13 |
404 |
|
38"' |
79 |
258 bp |
242 bp |
259 bp |
[TCTA]11 [TCTG]11 [TCTA]3 TA [TCTA]3 TCA [TCTA]2 TCCA TA [TCTA]11 |
404 |
|
38.2 |
260 bp |
244 bp |
261 bp |
SGM Plus |
CSF1PO
|
Other Names |
Chromosomal Location |
GenBank Accession |
|
CSF |
5q33.3-34; human c-fms proto-oncogene for CSF-1 receptor gene |
X14720; has 12 repeats |
Repeat: [AGAT] = GenBank top strand (commonly used)
|
Reported Primers |
Ref. |
PCR Primer Sequences |
|
Set 1 |
3 |
5'-AACCTGAGTCTGCCAAGGACTAGC-3' (AGAT strand) 5'-TTCCACACACCACTGGCCATCTTC-3' (TCTA strand) |
|
Set 2 |
Promega |
GenePrint® PowerPlex™ 1.1 |
|
Set 3 |
ABI |
AmpFlSTR® COfiler™ |
PCR Product Sizes of Observed Alleles
|
Allele (Repeat #) |
Set 1 & Set 2 |
Set 3 |
Repeat Structure |
Ref. |
|
6 |
291 bp |
281 bp |
[AGAT]6 |
|
|
7 |
295 bp |
285 bp |
[AGAT]7 |
153 |
|
8 |
299 bp |
289 bp |
[AGAT]8 |
28 |
|
9 |
303 bp |
293 bp |
[AGAT]9 |
28 |
|
9.1 |
302 bp |
294 bp |
variant allele |
|
|
10 |
307 bp |
297 bp |
[AGAT]10 |
28 |
|
10.1 |
308 bp |
298 bp |
variant allele |
|
|
10.3 |
310 bp |
300 bp |
Budowle 1998 |
|
|
11 |
311 bp |
301 bp |
[AGAT]11 |
28 |
|
12 |
315 bp |
305 bp |
[AGAT]12 |
28 |
|
12.1 |
316 bp |
306 bp |
Budowle 1998 |
|
|
13 |
319 bp |
309 bp |
[AGAT]13 |
28 |
|
14 |
323 bp |
313 bp |
[AGAT]14 |
28 |
|
15 |
327 bp |
317 bp |
[AGAT]15 |
285 |
|
16 |
331bp |
321 bp |
Margolis-Nunno,H., et. al, 2001 |
Autor:
Osvaldo Castillo Ugarte
PONTIFICIA UNIVERSIDAD CATÓLICA DE CHILE
FACULTAD DE DERECHO
DIRECCIÓN DE INVESTIGACIÓN
TESIS DE INVESTIGACIÓN JURIDICA:
Santiago, Diciembre de 2005
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